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meshing [2019/05/15 22:45]
Igor Chernyavsky [Overview] Links from Martin Turner and Alberto Gambaruto
meshing [2019/05/15 23:00] (current)
Igor Chernyavsky [Segmentation and Meshing tools for Image-based Modelling]
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 ===== Segmentation and Meshing tools for Image-based Modelling ===== ===== Segmentation and Meshing tools for Image-based Modelling =====
  
-Credits: Russell Garwood, David Smith, Yongle Sun, Martin Turner (Manchester), Jon Hill (York), Susheel Varma (Sheffield), Gowsihan Poologasundarampillai (Birmingham & DLS), Alberto Gambaruto (Bristol)\\ +Credits: Russell Garwood, David Smith, Yongle Sun, Martin Turner (Manchester), Jon Hill (York), Susheel Varma (Sheffield), Gowsihan Poologasundarampillai (Birmingham & DLS), Alberto Gambaruto (Bristol)
-//Disclaimer//: The list and descriptions are unavoidably subjective. Please [[question@math-biophys.info|get in touch]] if you notice any inaccuracies.+ 
 +<wrap lo>//Disclaimer//: The list and descriptions are unavoidably subjective. Please [[question@math-biophys.info|get in touch]] if you notice any inaccuracies.</wrap>
 ==== Overview ==== ==== Overview ====
  
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 | [[https://diamondlightsource.github.io/SuRVoS|SuRVoS]]                    | Linux/Win | 0 | Machine learning (ML)-based semi-automatic volume segmentation aimed at X-ray tomography | | [[https://diamondlightsource.github.io/SuRVoS|SuRVoS]]                    | Linux/Win | 0 | Machine learning (ML)-based semi-automatic volume segmentation aimed at X-ray tomography |
 | [[http://bio3d.colorado.edu/imod|IMOD]] | all | 0 | 3D reconstruction, segmentation and visualisation aimed at Electron Microscopy | | [[http://bio3d.colorado.edu/imod|IMOD]] | all | 0 | 3D reconstruction, segmentation and visualisation aimed at Electron Microscopy |
-| [[http://www.itksnap.org|ITK-SNAP]]     | all | 0 | User-friendly 3D (semi-)manual segmentation with some ML features for medical MRI, CT and US data | 
-| [[https://www.cti.gov.br/en/invesalius|InVesalius]] | all | 0 | Basic image reconstruction for MRI and (micro)tomography data | 
 | [[http://mib.helsinki.fi/features.html|Microscopy Image Browser]]         | all | 0 | ''Matlab''-based 2D/3D visualisation and segmentation tools for SEM and tomography | | [[http://mib.helsinki.fi/features.html|Microscopy Image Browser]]         | all | 0 | ''Matlab''-based 2D/3D visualisation and segmentation tools for SEM and tomography |
 +| [[http://www.itksnap.org|ITK-SNAP]]     | all | 0 | User-friendly 3D (semi-)manual segmentation with ML features for medical (MRI/CT/US) data |
 +| [[https://www.cti.gov.br/en/invesalius|InVesalius]] | all | 0 | Basic image reconstruction for MRI and (micro)tomography data |
 | [[https://www.slicer.org|3D Slicer]]  | all        | 0    | Advanced ''VTK''-based 3D visualisation and segmentation of medical images | | [[https://www.slicer.org|3D Slicer]]  | all        | 0    | Advanced ''VTK''-based 3D visualisation and segmentation of medical images |
 | [[http://www.paraview.org|ParaView]]  | all        | 0    | ''VTK''-based 3D simulation data visualisation, a free analogue to ''TecPlot'', ''Origin'', ''Igor Pro'', etc. | | [[http://www.paraview.org|ParaView]]  | all        | 0    | ''VTK''-based 3D simulation data visualisation, a free analogue to ''TecPlot'', ''Origin'', ''Igor Pro'', etc. |
meshing.1557956716.txt.gz · Last modified: 2019/05/15 22:45 by Igor Chernyavsky
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